STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74842.1Conjugative transposon protein TraA family protein; Psort location: Cytoplasmic, score: 8.96. (265 aa)    
Predicted Functional Partners:
KXB74840.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.840
KXB74839.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 2.4e-11 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
 
     0.837
KXB74850.1
Conjugative transposon protein TraI.
 
     0.794
KXB76635.1
Conjugative transposon protein TraO.
 
     0.789
KXB74856.1
Conjugative transposon protein TraO.
 
     0.789
KXB74854.1
Conjugative transposon TraM protein; KEGG: hie:R2846_1321 3.0e-05 iga; Immunoglobulin A1 protease.
 
     0.781
KXB74857.1
Conjugative transposon protein TraQ.
 
     0.775
KXB81224.1
Hypothetical protein; KEGG: rho:RHOM_08580 0.00027 DNA topoisomerase; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 8.96.
  
     0.774
KXB76637.1
Conjugative transposon TraM protein.
 
     0.774
KXB76568.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.774
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.