Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB74852.1Conjugative transposon TraK protein. (207 aa)    
Predicted Functional Partners:
KXB74851.1
Conjugative transposon TraJ protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.918
KXB74849.1
Conjugation system ATPase, TraG family; Psort location: Cytoplasmic, score: 9.12.
 
  
 0.901
KXB74850.1
Conjugative transposon protein TraI.
 
   
 0.888
KXB74847.1
Conjugative transposon protein TraE; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.870
KXB74848.1
Conjugative transposon protein TraF; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.868
KXB74855.1
Conjugative transposon TraN protein.
 
   
 0.858
KXB74854.1
Conjugative transposon TraM protein; KEGG: hie:R2846_1321 3.0e-05 iga; Immunoglobulin A1 protease.
 
     0.856
KXB76642.1
Hypothetical protein.
 
  
 0.830
KXB76561.1
Conjugation system ATPase, TraG family; Psort location: Cytoplasmic, score: 9.12.
 
  
 0.830
KXB77283.1
Conjugation system ATPase, TraG family; Psort location: Cytoplasmic, score: 9.12.
 
  
 0.829
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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