Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB74857.1Conjugative transposon protein TraQ. (161 aa)    
Predicted Functional Partners:
KXB74856.1
Conjugative transposon protein TraO.
 
     0.942
KXB74855.1
Conjugative transposon TraN protein.
 
     0.939
KXB74854.1
Conjugative transposon TraM protein; KEGG: hie:R2846_1321 3.0e-05 iga; Immunoglobulin A1 protease.
 
     0.901
KXB74850.1
Conjugative transposon protein TraI.
 
     0.828
KXB74745.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A7234 4.4e-71 phage lysozyme.
 
     0.817
KXB76635.1
Conjugative transposon protein TraO.
 
     0.783
KXB76636.1
Conjugative transposon TraN protein.
 
     0.773
KXB76499.1
Hypothetical protein; KEGG: blf:BLIF_1156 0.0053 DNA topoisomerase; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 8.96.
  
     0.771
KXB74842.1
Conjugative transposon protein TraA family protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.771
KXB81224.1
Hypothetical protein; KEGG: rho:RHOM_08580 0.00027 DNA topoisomerase; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 8.96.
  
     0.770
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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