Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB74702.1Site-specific recombinase, phage integrase family; KEGG: pfe:PSF113_1062 1.9e-05 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (410 aa)    
Predicted Functional Partners:
KXB74701.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.712
KXB75248.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.638
KXB74703.1
Hypothetical protein.
       0.543
KXB74700.1
Hypothetical protein.
       0.496
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
    
  0.464
KXB75683.1
Putative tyrosine recombinase XerC; KEGG: bsr:I33_1800 2.7e-39 xerC; ATP-dependent protease HslV K03733; Psort location: Cytoplasmic, score: 9.97; Belongs to the 'phage' integrase family.
  
     0.408
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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