STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74641.1Hypothetical protein; KEGG: efc:EFAU004_00580 5.3e-06 ISEfa7, transposase; Psort location: Cytoplasmic, score: 8.96. (274 aa)    
Predicted Functional Partners:
KXB81445.1
ISPg7, transposase family protein; KEGG: xop:PXO_04446 5.7e-34 tRNA nucleotidyltransferase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme); Psort location: Cytoplasmic, score: 8.96.
 
     0.666
KXB77364.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.637
KXB77397.1
Hypothetical protein; KEGG: efc:EFAU004_01897 0.00078 IS1380 family transposase; Psort location: Cytoplasmic, score: 8.96.
  
     0.622
KXB75442.1
Transposase, IS4 family; KEGG: efc:EFAU004_01897 0.0036 IS1380 family transposase; Psort location: Cytoplasmic, score: 8.96.
  
     0.619
KXB76507.1
KEGG: efu:HMPREF0351_12109 2.7e-05 TetR/AcrR family transcriptional regulator.
  
     0.618
KXB77617.1
P-loop domain protein, KAP family; KEGG: cbk:CLL_A3035 0.00012 endopeptidase O; K07386 putative endopeptidase; Psort location: Cytoplasmic, score: 8.96.
  
     0.580
KXB74685.1
Hypothetical protein.
      0.570
KXB78743.1
OmpA family protein; Psort location: OuterMembrane, score: 9.93.
  
     0.536
KXB74642.1
KEGG: pdi:BDI_3252 2.4e-136 DNA-methyltransferase; K07319 putative adenine-specific DNA-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.499
KXB74643.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.499
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.