Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB74565.1Tape measure domain protein; KEGG: edi:EDI_341030 2.5e-21 intracellular protein transport protein USO1; Psort location: CytoplasmicMembrane, score: 9.82. (1166 aa)    
Predicted Functional Partners:
KXB74566.1
Hypothetical protein.
       0.773
KXB74564.1
Hypothetical protein.
       0.723
KXB78454.1
DNA-binding protein HU; KEGG: phu:Phum_PHUM249060 0.00012 hypothetical protein; K14437 chromodomain-helicase-DNA-binding protein 7; Psort location: Cytoplasmic, score: 8.96; Belongs to the bacterial histone-like protein family.
 
 
   0.717
KXB81329.1
Beta-lactamase; KEGG: bth:BT_4507 4.3e-50 beta-lactamase; K01467 beta-lactamase; Psort location: Periplasmic, score: 9.23.
  
     0.715
KXB74563.1
Hypothetical protein.
       0.707
KXB80410.1
Hypothetical protein; KEGG: zga:zobellia_368 2.6e-256 susB; alpha-glucosidase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.669
KXB77569.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.669
KXB75113.1
Putative phage DNA packaging protein.
   
   0.668
KXB81321.1
DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 8.96.
  
     0.653
KXB81324.1
DNA binding domain, excisionase family.
  
     0.647
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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