STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74461.1ABC transporter transmembrane region; KEGG: osp:Odosp_0369 2.0e-265 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00. (572 aa)    
Predicted Functional Partners:
KXB74433.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 1.6e-59 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82.
     0.985
KXB76925.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 1.7e-69 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.972
KXB77855.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 1.2e-45 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.949
KXB74460.1
Hypothetical protein.
       0.762
KXB77868.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.720
KXB74434.1
Hypothetical protein.
  
  0.695
KXB77866.1
Hypothetical protein; KEGG: mif:Metin_0376 0.0027 alpha-L-glutamate ligase, RimK family; K15740 tetrahydromethanopterin:alpha-L-glutamate ligase; Psort location: Cytoplasmic, score: 8.96.
  
     0.634
KXB81221.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.439
KXB81592.1
Hypothetical protein.
  
  0.421
KXB81560.1
Hypothetical protein.
  
  0.421
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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