Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB74387.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
KXB74382.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB74383.1
Hypothetical protein.
       0.773
KXB74384.1
Protein, SNF2 family; KEGG: api:100165578 1.0e-13 helicase domino-like; K11320 E1A-binding protein p400; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB74385.1
KEGG: nis:NIS_1681 9.5e-06 phosphoadenosine phosphosulfate reductase.
       0.773
KXB74386.1
Immunoglobulin-binding regulator B family protein; Psort location: Cytoplasmic, score: 9.97.
       0.773
KXB74381.1
Hypothetical protein.
       0.487
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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