Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB74389.1KEGG: bmq:BMQ_1457 5.2e-13 Isoprenylcysteine carboxyl methyltransferase K16168; Psort location: CytoplasmicMembrane, score: 10.00. (172 aa)    
Predicted Functional Partners:
KXB78899.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.561
KXB74390.1
KEGG: cyb:CYB_1515 0.0010 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
       0.543
KXB74391.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.540
KXB74319.1
Hypothetical protein; KEGG: sgn:SGRA_3959 0.00020 glycosyl transferase family protein; Psort location: Periplasmic, score: 9.84.
  
     0.522
KXB78900.1
Hypothetical protein.
  
     0.491
KXB78897.1
Bacterial mobilization protein MobC.
  
     0.404
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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