STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74401.1Endonuclease/exonuclease/phosphatase family protein. (349 aa)    
Predicted Functional Partners:
KXB74400.1
Hypothetical protein; KEGG: ccm:Ccan_21620 7.2e-71 putative Metallocarboxypeptidase D.
 
     0.921
KXB74399.1
Hypothetical protein.
 
     0.889
KXB74402.1
Hypothetical protein; KEGG: afd:Alfi_3036 4.3e-34 G:T/U mismatch-specific DNA glycosylase; Psort location: Cytoplasmic, score: 8.96.
       0.768
udk
Uridine kinase; KEGG: pmz:HMPREF0659_A7128 5.0e-95 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 9.97.
    
  0.765
KXB79941.1
Signal peptide protein, YSIRK family; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.542
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.523
KXB77460.1
Hypothetical protein.
  
     0.514
KXB79102.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 0.0016 TPR repeat-containing serine/threonine protein kinase K00908.
  
     0.480
KXB74247.1
Hypothetical protein.
  
     0.480
KXB74996.1
KEGG: pmz:HMPREF0659_A6645 3.1e-125 phosphorylase family protein; K00757 uridine phosphorylase; Psort location: Cytoplasmic, score: 9.97.
  
  
  0.472
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.