Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
udkUridine kinase; KEGG: pmz:HMPREF0659_A7128 5.0e-95 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 9.97. (207 aa)    
Predicted Functional Partners:
KXB78942.1
KEGG: pdn:HMPREF9137_0478 9.9e-106 uracil phosphoribosyltransferase K00761; Psort location: Cytoplasmic, score: 9.97.
  
 0.958
KXB78956.1
KEGG: pmz:HMPREF0659_A6360 5.0e-63 putative cytidine deaminase; K01489 cytidine deaminase.
    
 0.928
KXB74324.1
D-phosphoglycerate dehydrogenase; KEGG: pit:PIN17_A1251 6.5e-125 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein; K00058 D-3-phosphoglycerate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
   
  0.882
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
 
 0.866
cmk
Cytidylate kinase; KEGG: pmz:HMPREF0659_A7170 4.4e-87 cmk; cytidylate kinase K00945; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.865
KXB74996.1
KEGG: pmz:HMPREF0659_A6645 3.1e-125 phosphorylase family protein; K00757 uridine phosphorylase; Psort location: Cytoplasmic, score: 9.97.
    
 0.862
KXB79099.1
KEGG: pmz:HMPREF0659_A6727 4.3e-112 pyrF; orotidine 5'-phosphate decarboxylase K01591; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.850
surE
SurE-like protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.847
KXB80273.1
5'-nucleotidase protein; KEGG: pmz:HMPREF0659_A5589 5.8e-236 5'-nucleotidase, C-terminal domain protein; K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Psort location: Periplasmic, score: 9.76; Belongs to the 5'-nucleotidase family.
   
 
  0.845
KXB77335.1
Ser/Thr phosphatase family protein; KEGG: bsa:Bacsa_3012 1.1e-76 5'-nucleotidase; Psort location: Periplasmic, score: 9.76.
   
 
  0.845
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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