STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74329.1Hemerythrin HHE cation binding domain protein; KEGG: fal:FRAAL1304 1.4e-07 protein-glutamate methylesterase; Psort location: Cytoplasmic, score: 8.96. (323 aa)    
Predicted Functional Partners:
KXB74330.1
KEGG: npu:Npun_F0484 2.0e-06 LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
 
    
0.793
KXB81968.1
Transcriptional regulator, LuxR family; KEGG: ppo:PPM_0372 8.8e-11 nreC1; chemotaxis response regulator protein-glutamate methylesterase K07696.
 
     0.755
KXB74328.1
DNA-binding regulatory protein, YebC/PmpR family; KEGG: lru:HMPREF0538_21781 7.3e-39 glucose-1-phosphate adenylyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.494
KXB78290.1
Rubredoxin; KEGG: mew:MSWAN_2151 1.4e-16 hydroxylamine reductase; K00378 hydroxylamine reductase; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.490
pheT
KEGG: pmz:HMPREF0659_A6941 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.435
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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