Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB74333.1Gliding motility-associated protein GldE; KEGG: apb:SAR116_1911 2.3e-42 hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (440 aa)    
Predicted Functional Partners:
KXB74334.1
Hypothetical protein; KEGG: fbr:FBFL15_3061 1.2e-11 sfp; putative phosphopantetheinyl transferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.820
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.796
KXB74332.1
KEGG: shn:Shewana3_3590 8.0e-17 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.26.
       0.793
KXB74331.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.715
KXB74335.1
Glycosyltransferase, group 2 family protein; KEGG: sat:SYN_00250 6.0e-99 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
       0.531
KXB74336.1
Hypothetical protein; KEGG: ddi:DDB_G0282525 0.00028 hypothetical protein; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.531
KXB74337.1
SpoIID/LytB domain protein; KEGG: bya:BANAU_3467 1.3e-11 lytB; modifier protein of major autolysin LytC; Psort location: Cytoplasmic, score: 8.96.
       0.511
KXB74338.1
Hypothetical protein; KEGG: rcu:RCOM_0229730 4.7e-29 beta-glucosidase, putative; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.509
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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