STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74338.1Hypothetical protein; KEGG: rcu:RCOM_0229730 4.7e-29 beta-glucosidase, putative; Psort location: CytoplasmicMembrane, score: 10.00. (448 aa)    
Predicted Functional Partners:
KXB74335.1
Glycosyltransferase, group 2 family protein; KEGG: sat:SYN_00250 6.0e-99 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
 
     0.922
KXB74336.1
Hypothetical protein; KEGG: ddi:DDB_G0282525 0.00028 hypothetical protein; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.900
KXB74337.1
SpoIID/LytB domain protein; KEGG: bya:BANAU_3467 1.3e-11 lytB; modifier protein of major autolysin LytC; Psort location: Cytoplasmic, score: 8.96.
 
     0.882
KXB77486.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C0457 2.4e-17 ampG; muropeptide transporter K08218; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.728
KXB78467.1
Transporter, major facilitator family protein; KEGG: rcu:RCOM_0229730 2.3e-65 beta-glucosidase, putative; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.687
KXB78134.1
Hypothetical protein; KEGG: rcu:RCOM_0229730 1.8e-53 beta-glucosidase, putative; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.667
KXB74339.1
Peptidase, M48 family; KEGG: pmz:HMPREF0659_A5502 2.5e-100 peptidase, M48 family.
 
     0.650
KXB81740.1
Hypothetical protein.
  
     0.595
KXB74332.1
KEGG: shn:Shewana3_3590 8.0e-17 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.26.
     
 0.507
KXB74333.1
Gliding motility-associated protein GldE; KEGG: apb:SAR116_1911 2.3e-42 hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.506
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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