Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB74339.1Peptidase, M48 family; KEGG: pmz:HMPREF0659_A5502 2.5e-100 peptidase, M48 family. (295 aa)    
Predicted Functional Partners:
KXB74338.1
Hypothetical protein; KEGG: rcu:RCOM_0229730 4.7e-29 beta-glucosidase, putative; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.668
KXB74997.1
Peptidase, M23 family; KEGG: eci:UTI89_C0735 1.3e-23 tolA; cell envelope integrity inner membrane protein TolA K03646.
   
   0.636
KXB74335.1
Glycosyltransferase, group 2 family protein; KEGG: sat:SYN_00250 6.0e-99 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
 
     0.624
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.569
KXB74337.1
SpoIID/LytB domain protein; KEGG: bya:BANAU_3467 1.3e-11 lytB; modifier protein of major autolysin LytC; Psort location: Cytoplasmic, score: 8.96.
       0.539
KXB74336.1
Hypothetical protein; KEGG: ddi:DDB_G0282525 0.00028 hypothetical protein; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.517
KXB78292.1
Tetratricopeptide repeat protein; KEGG: apb:SAR116_1534 1.5e-05 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 0.487
KXB81943.1
Tetratricopeptide repeat domain protein; KEGG: ccm:Ccan_18230 2.0e-91 PIF1/RRM3 DNA helicase-like protein; Psort location: Cytoplasmic, score: 8.96.
   
 0.439
KXB79121.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 1.1e-53 h16_A2036; membrane protease subunits, stomatin/prohibitin homologs; Psort location: Cytoplasmic, score: 8.96.
 
     0.411
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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