STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74121.1Hypothetical protein. (318 aa)    
Predicted Functional Partners:
KXB74119.1
Hypothetical protein.
       0.849
lspA
Signal peptidase II family protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.849
KXB74123.1
Peptidase, M23 family; KEGG: zga:zobellia_3141 1.1e-53 metallopeptidase.
 
     0.844
KXB74124.1
Peptidase, C69 family; KEGG: vfu:vfu_B00471 2.0e-25 dipeptidase; K08659 dipeptidase; Psort location: Periplasmic, score: 9.84.
       0.770
KXB78964.1
BNR/Asp-box repeat protein.
  
     0.766
KXB74186.1
Hypothetical protein.
  
     0.766
KXB80092.1
Hypothetical protein; KEGG: pkn:PKH_011660 0.0030 mannose-6-phosphate isomerase.
  
     0.764
KXB81961.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.762
KXB81366.1
Hypothetical protein.
  
     0.758
KXB79138.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.758
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.