STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74134.1Hypothetical protein; KEGG: cls:CXIVA_25380 8.3e-07 hypothetical protein; K07271 lipopolysaccharide cholinephosphotransferase. (84 aa)    
Predicted Functional Partners:
KXB74131.1
LicC family protein; KEGG: fnu:FN1237 9.1e-48 choline kinase; Psort location: Cytoplasmic, score: 8.96.
     
 0.599
KXB74133.1
KEGG: fnu:FN1670 3.5e-94 choline kinase; Psort location: Cytoplasmic, score: 8.96.
     
 0.579
KXB74132.1
Putative membrane protein; KEGG: cco:CCC13826_1128 0.0010 phosphate acetyltransferase (phosphotransacetylase); Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.553
KXB74135.1
Hypothetical protein; KEGG: sor:SOR_1654 5.5e-25 wefL; LicD superfamily protein; K07271 lipopolysaccharide cholinephosphotransferase.
       0.435
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.