STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74141.1Putative phage head-tail adaptor; KEGG: pmz:HMPREF0659_A6762 3.8e-287 UvrD/REP helicase; Psort location: Cytoplasmic, score: 9.97; Belongs to the helicase family. UvrD subfamily. (1140 aa)    
Predicted Functional Partners:
KXB74142.1
Hypothetical protein; KEGG: sgn:SGRA_1994 0.0017 uvrD; DNA-dependent ATPase I and helicase II K03657; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.994
KXB74140.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
       0.808
KXB78060.1
Hypothetical protein; KEGG: bth:BT_3982 6.6e-132 exonuclease V subunit alpha; K01144 exodeoxyribonuclease V.
 
   0.754
KXB78758.1
Hypothetical protein; KEGG: ccm:Ccan_18630 8.8e-11 riboflavin synthase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
  
     0.701
KXB79578.1
Hypothetical protein; KEGG: edi:EDI_341030 2.8e-18 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
  
     0.649
KXB81739.1
Hypothetical protein; KEGG: bbb:BIF_01564 2.6e-98 Methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.647
KXB79112.1
UvrD/REP helicase; KEGG: pmz:HMPREF0659_A6530 7.4e-291 UvrD/REP helicase K03657; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.572
KXB78296.1
LysM domain protein; KEGG: ccm:Ccan_15880 1.3e-20 putative lysozyme.
  
     0.544
KXB81943.1
Tetratricopeptide repeat domain protein; KEGG: ccm:Ccan_18230 2.0e-91 PIF1/RRM3 DNA helicase-like protein; Psort location: Cytoplasmic, score: 8.96.
  
   0.537
KXB81224.1
Hypothetical protein; KEGG: rho:RHOM_08580 0.00027 DNA topoisomerase; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 8.96.
  
   0.510
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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