Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB74148.1TonB-dependent receptor. (709 aa)    
Predicted Functional Partners:
KXB77794.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.738
KXB74315.1
Hypothetical protein.
  
    0.662
KXB79966.1
TonB-dependent receptor plug domain protein; KEGG: ccm:Ccan_21620 2.1e-05 putative Metallocarboxypeptidase D; Psort location: OuterMembrane, score: 9.49.
  
     0.625
KXB80132.1
TonB-dependent receptor; KEGG: hip:CGSHiEE_01810 2.4e-07 bcp; TonB K03832; Psort location: Periplasmic, score: 9.83.
  
   0.616
KXB74149.1
Hypothetical protein.
       0.581
KXB74316.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 1.4e-07 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 10.00.
  
     0.575
KXB78281.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.93.
  
     0.538
KXB77617.1
P-loop domain protein, KAP family; KEGG: cbk:CLL_A3035 0.00012 endopeptidase O; K07386 putative endopeptidase; Psort location: Cytoplasmic, score: 8.96.
  
     0.535
KXB78743.1
OmpA family protein; Psort location: OuterMembrane, score: 9.93.
  
     0.531
KXB74150.1
Hypothetical protein.
       0.519
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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