STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74162.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (71 aa)    
Predicted Functional Partners:
KXB74161.1
KEGG: nmh:NMBH4476_0274 4.2e-12 phosphotransferase family protein K07102; Psort location: Cytoplasmic, score: 9.97.
       0.798
KXB74163.1
Hypothetical protein; KEGG: cfu:CFU_3842 2.4e-31 perM; putative permease; Psort location: CytoplasmicMembrane, score: 10.00.
       0.570
tdk
Thymidine kinase; KEGG: pit:PIN17_A1240 7.7e-83 tdk; thymidine kinase K00857; Psort location: Cytoplasmic, score: 9.97.
       0.539
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.