Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB74180.1KEGG: pmz:HMPREF0659_A6881 1.9e-269 carboxyl transferase domain protein; K01966 propionyl-CoA carboxylase beta chain; Psort location: Cytoplasmic, score: 9.97. (521 aa)    
Predicted Functional Partners:
KXB74182.1
Biotin-requiring enzyme; KEGG: cst:CLOST_0944 8.0e-17 gcdC; glutaconyl-CoA decarboxylase subunit gamma.
 
 0.999
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.907
KXB74206.1
KEGG: pmz:HMPREF0659_A5436 5.1e-86 biotin--[acetyl-CoA-carboxylase] ligase K03524; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.841
KXB79010.1
KEGG: pru:PRU_2034 8.8e-240 acyl-CoA dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.804
KXB74181.1
Hypothetical protein.
       0.778
lon
Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
    
  0.679
KXB77772.1
KEGG: pdn:HMPREF9137_0543 0. 2-oxoacid:acceptor oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.648
KXB76224.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.626
KXB75999.1
KEGG: bsa:Bacsa_2689 5.7e-55 Enoyl-CoA hydratase.
  
 
 0.600
KXB79955.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.564
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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