STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74185.1KEGG: pmz:HMPREF0659_A6886 1.1e-106 starch synthase catalytic domain protein; K00703 starch synthase. (269 aa)    
Predicted Functional Partners:
KXB79021.1
KEGG: pmz:HMPREF0659_A6687 0. alpha amylase, catalytic domain protein; K00700 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.972
KXB79902.1
KEGG: pmz:HMPREF0659_A6343 0. glgP; alpha-glucan phosphorylase K00688; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.947
KXB75627.1
Pullulanase, type I; KEGG: pmz:HMPREF0659_A5154 2.5e-274 pulA; pullulanase, type I K01200; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.939
KXB75626.1
KEGG: pdn:HMPREF9137_0726 0. putative 4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.840
KXB74186.1
Hypothetical protein.
  
    0.810
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
    0.717
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
       0.713
KXB75628.1
Alpha amylase, catalytic domain protein; KEGG: pru:PRU_2700 2.2e-213 neopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.686
KXB74187.1
Hypothetical protein; KEGG: bvu:BVU_3773 0.0092 oxidoreductase; K00540.
       0.660
KXB80815.1
KEGG: pdn:HMPREF9137_1479 2.2e-204 glycosyltransferase group 1 family protein; Psort location: Cytoplasmic, score: 8.96.
     
 0.644
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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