Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB74186.1Hypothetical protein. (479 aa)    
Predicted Functional Partners:
KXB78964.1
BNR/Asp-box repeat protein.
  
   0.966
KXB78261.1
KEGG: bvu:BVU_1166 1.1e-12 peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase.
  
 
   0.930
KXB80600.1
Hypothetical protein; KEGG: pyo:PY00139 0.00064 erythrocyte membrane protein; K09561 STIP1 homology and U-box containing protein 1; Psort location: OuterMembrane, score: 9.49.
 
 
   0.910
KXB79956.1
Outer membrane insertion signal domain protein; Psort location: OuterMembrane, score: 9.52.
 
 
   0.898
KXB78962.1
Outer membrane protein assembly complex, YaeT protein; KEGG: apb:SAR116_0511 3.2e-18 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
    
   0.886
KXB74293.1
Outer membrane protein, OMP85 family.
  
 
   0.863
KXB80145.1
Outer membrane assembly lipoprotein YfiO.
  
   0.861
KXB81368.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
 
 
   0.853
KXB79013.1
Hypothetical protein.
    
   0.847
KXB74192.1
Sporulation and cell division repeat protein.
 
     0.808
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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