Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trpFKEGG: pmz:HMPREF0659_A5926 6.9e-50 putative N-(5'phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase; Psort location: Cytoplasmic, score: 8.96; Belongs to the TrpF family. (248 aa)    
Predicted Functional Partners:
KXB74201.1
KEGG: pru:PRU_1458 1.7e-62 trpC; indole-3-glycerol phosphate synthase K01609; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.999
KXB75995.1
KEGG: pit:PIN17_A1708 2.1e-41 glutamine amidotransferase; K01658 anthranilate synthase component II; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.968
KXB75994.1
KEGG: osp:Odosp_0584 6.7e-84 Aminodeoxychorismate synthase K01665; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.911
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.726
KXB79166.1
KEGG: pdn:HMPREF9137_1471 1.2e-157 putative 3-deoxy-7-phosphoheptulonate synthase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.690
KXB74203.1
Transcription termination/antitermination factor NusG.
     
 0.631
KXB74200.1
KEGG: pdn:HMPREF9137_1184 5.8e-85 rpe; ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 9.26.
       0.578
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.510
KXB74143.1
Haloacid dehalogenase-like hydrolase; KEGG: zga:zobellia_482 1.1e-42 nanP; N-acylneuraminate-9-phosphatase K07025; Psort location: Cytoplasmic, score: 8.96.
    
  0.452
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
 
 0.444
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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