STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74205.1Hypothetical protein; KEGG: sen:SACE_6045 2.8e-14 endonuclease K07460; Belongs to the UPF0102 family. (113 aa)    
Predicted Functional Partners:
KXB74206.1
KEGG: pmz:HMPREF0659_A5436 5.1e-86 biotin--[acetyl-CoA-carboxylase] ligase K03524; Psort location: Cytoplasmic, score: 9.97.
       0.821
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.821
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.709
KXB80435.1
DNA protecting protein DprA; KEGG: ccm:Ccan_01460 9.4e-62 protein smf K04096; Psort location: Cytoplasmic, score: 8.96.
 
    0.583
KXB76237.1
Mg chelatase-like protein; KEGG: ccm:Ccan_16640 1.5e-166 competence protein comM K07391; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.521
KXB74208.1
Cytochrome C biogenesis protein transmembrane region; KEGG: bsa:Bacsa_2272 1.0e-213 Protein-disulfide reductase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.450
KXB74209.1
Hypothetical protein.
       0.404
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.