STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74206.1KEGG: pmz:HMPREF0659_A5436 5.1e-86 biotin--[acetyl-CoA-carboxylase] ligase K03524; Psort location: Cytoplasmic, score: 9.97. (262 aa)    
Predicted Functional Partners:
KXB74182.1
Biotin-requiring enzyme; KEGG: cst:CLOST_0944 8.0e-17 gcdC; glutaconyl-CoA decarboxylase subunit gamma.
 
  
 0.974
KXB74180.1
KEGG: pmz:HMPREF0659_A6881 1.9e-269 carboxyl transferase domain protein; K01966 propionyl-CoA carboxylase beta chain; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.970
KXB78028.1
Hypothetical protein; KEGG: abm:ABSDF0678 0.0025 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433.
  
 0.904
KXB74255.1
Phosphoribosylamine--glycine ligase; KEGG: ctc:CTC01706 3.4e-25 carbamoyl-phosphate synthase large chain K01955; Psort location: Cytoplasmic, score: 8.96.
  
 0.904
KXB74256.1
ATP-grasp domain protein; KEGG: ctc:CTC01706 4.4e-32 carbamoyl-phosphate synthase large chain K01955; Psort location: Cytoplasmic, score: 8.96.
  
 0.904
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.849
KXB74205.1
Hypothetical protein; KEGG: sen:SACE_6045 2.8e-14 endonuclease K07460; Belongs to the UPF0102 family.
       0.821
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.798
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.656
KXB77475.1
KEGG: osp:Odosp_1555 4.6e-53 universal protein YeaZ; K14742 hypothetical protease; Psort location: Cytoplasmic, score: 8.96.
  
    0.615
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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