STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74217.1Sigma-54 interaction domain protein; KEGG: pfe:PSF113_3093 7.0e-58 transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; Psort location: Cytoplasmic, score: 9.97. (414 aa)    
Predicted Functional Partners:
KXB80396.1
KEGG: enl:A3UG_20300 9.3e-55 RNA polymerase factor sigma-54; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.832
KXB74218.1
Hypothetical protein.
       0.794
KXB74219.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.765
KXB74220.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.755
KXB77266.1
Sigma-54 interaction domain protein; KEGG: pfe:PSF113_0046 1.1e-65 algB; protein AlgB; Psort location: Cytoplasmic, score: 9.97.
 
 
0.732
KXB75672.1
Hypothetical protein.
   
 0.683
KXB74216.1
Putative transcriptional regulatory protein ResD; KEGG: chu:CHU_3042 1.4e-37 two-component response regulator K07658; Psort location: Cytoplasmic, score: 9.97.
   
 0.653
KXB79979.1
MazG family protein; KEGG: pit:PIN17_A1669 1.2e-116 MazG family protein; K02428 dITP/XTP pyrophosphatase; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.479
KXB78290.1
Rubredoxin; KEGG: mew:MSWAN_2151 1.4e-16 hydroxylamine reductase; K00378 hydroxylamine reductase; Psort location: Cytoplasmic, score: 9.26.
     
 0.461
KXB80817.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bvu:BVU_4096 1.2e-95 two-component system sensor histidine kinase; K02484 two-component system, OmpR family, sensor kinase; Psort location: CytoplasmicMembrane, score: 7.88.
    
 0.424
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.