STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74218.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
KXB74219.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.902
KXB74220.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.862
KXB74217.1
Sigma-54 interaction domain protein; KEGG: pfe:PSF113_3093 7.0e-58 transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; Psort location: Cytoplasmic, score: 9.97.
       0.794
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
    0.769
KXB77641.1
Hypothetical protein; KEGG: zin:ZICARI_156 0.00066 tilS; putative tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase; Psort location: OuterMembrane, score: 9.49.
  
     0.749
KXB74293.1
Outer membrane protein, OMP85 family.
  
     0.738
KXB79149.1
Hypothetical protein.
  
    0.712
KXB79960.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.702
KXB80146.1
Hypothetical protein.
  
     0.694
KXB78561.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.678
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.