STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74237.1HDIG domain protein; KEGG: ase:ACPL_4138 8.9e-18 2',3'-cyclic-nucleotide 2'-phosphodiesterase K06950; Psort location: Cytoplasmic, score: 8.96. (178 aa)    
Predicted Functional Partners:
KXB74236.1
HMGL-like protein; KEGG: pit:PIN17_A1140 2.5e-290 carboxylase domain protein; K01960 pyruvate carboxylase subunit B; Psort location: Cytoplasmic, score: 9.97.
       0.708
KXB75695.1
OmpA family protein; KEGG: apb:SAR116_2281 1.8e-16 flagellar motor protein K02557; Psort location: CytoplasmicMembrane, score: 9.82.
    
   0.681
KXB74235.1
Hypothetical protein.
       0.612
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.548
KXB74233.1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein; KEGG: dat:HRM2_03500 2.9e-177 ppsA2; protein PpsA2; Psort location: Cytoplasmic, score: 8.96.
 
    0.474
KXB80100.1
Sporulation and cell division repeat protein; KEGG: bpu:BPUM_1632 5.3e-07 cwlC; N-acetylmuramoyl-L-alanine amidase K01448.
  
     0.451
KXB75996.1
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
  
  
  0.445
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.421
KXB79622.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
       0.405
KXB81389.1
Hypothetical protein.
  
     0.403
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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