STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74242.1Acyltransferase family protein; KEGG: gfo:GFO_0085 5.5e-57 hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (383 aa)    
Predicted Functional Partners:
KXB74241.1
Transcriptional regulator, DeoR family; KEGG: lcb:LCABL_29260 1.1e-28 nadD; Nicotinic acid mononucleotide adenyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.755
KXB82126.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.570
KXB78042.1
KEGG: pmz:HMPREF0659_A6220 3.3e-137 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 9.46.
  
 
 0.470
KXB78047.1
KEGG: rai:RA0C_1856 1.1e-17 pasta domain containing protein; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
       0.405
KXB78048.1
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.405
ddl
D-ala D-ala ligase protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.405
KXB78050.1
Hypothetical protein.
       0.405
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.