Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB74254.1DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: psp:PSPPH_3420 4.2e-114 aminotransferase K01726; Psort location: Cytoplasmic, score: 9.97; Belongs to the DegT/DnrJ/EryC1 family. (369 aa)    
Predicted Functional Partners:
KXB74255.1
Phosphoribosylamine--glycine ligase; KEGG: ctc:CTC01706 3.4e-25 carbamoyl-phosphate synthase large chain K01955; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.915
KXB74253.1
Hypothetical protein; KEGG: efc:EFAU004_01963 1.7e-13 Acyltransferase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.831
KXB74256.1
ATP-grasp domain protein; KEGG: ctc:CTC01706 4.4e-32 carbamoyl-phosphate synthase large chain K01955; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.828
KXB78766.1
Putative epimerase/dehydratase WbiI; KEGG: ccm:Ccan_23400 9.9e-122 capsular polysaccharide biosynthesis protein capD; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.813
KXB74257.1
Polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 2.3e-08 cytosol aminopeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.810
KXB74258.1
Hypothetical protein; KEGG: cmr:Cycma_3710 1.7e-32 hypothetical protein; K12582 TDP-Fuc4NAc transferase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.763
KXB81973.1
KEGG: pdn:HMPREF9137_1300 1.4e-184 rffG; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 8.96; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.755
KXB78123.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.690
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
    
 0.649
fcl
NAD dependent epimerase/dehydratase family protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
 
 0.637
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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