STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74263.1Hypothetical protein; KEGG: pdn:HMPREF9137_0720 1.8e-10 arylsulfatase; Psort location: CytoplasmicMembrane, score: 10.00. (179 aa)    
Predicted Functional Partners:
KXB74264.1
Arylsulfatase; KEGG: pdn:HMPREF9137_0720 8.1e-95 arylsulfatase; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
KXB74262.1
Bacterial transferase hexapeptide repeat protein; KEGG: gka:GK3309 2.9e-19 serine acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.26.
       0.613
KXB74261.1
Hypothetical protein.
       0.534
KXB74265.1
KEGG: pdn:HMPREF9137_1465 1.0e-181 nucleotide sugar dehydrogenase; K00012 UDPglucose 6-dehydrogenase; Psort location: Cytoplasmic, score: 9.26.
       0.427
KXB74260.1
Hypothetical protein; KEGG: etd:ETAF_1795 3.2e-09 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.412
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.