STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74269.1Urea transporter; Psort location: CytoplasmicMembrane, score: 10.00. (289 aa)    
Predicted Functional Partners:
KXB82200.1
Hypothetical protein.
  
     0.739
KXB74012.1
TM2 domain protein; KEGG: tsp:Tsp_01714 0.00037 DNA polymerase kappa; K03511 DNA polymerase kappa subunit; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.557
KXB74267.1
PSP1 protein; KEGG: gka:GK0026 3.0e-40 signal peptidase II.
       0.507
KXB74268.1
Gliding motility-associated lipoprotein GldH.
       0.507
KXB74266.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A5422 1.4e-136 hypothetical protein; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 8.96.
       0.417
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.