Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB74010.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (100 aa)    
Predicted Functional Partners:
KXB74011.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.948
KXB74012.1
TM2 domain protein; KEGG: tsp:Tsp_01714 0.00037 DNA polymerase kappa; K03511 DNA polymerase kappa subunit; Psort location: CytoplasmicMembrane, score: 9.82.
       0.779
KXB74227.1
RND transporter, HAE1 family; KEGG: rcp:RCAP_rcc02895 4.4e-158 mdtF; multidrug resistance protein MdtF K03296; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.756
KXB78784.1
Efflux transporter, RND family, MFP subunit; KEGG: apb:SAR116_2008 6.1e-05 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.747
KXB74228.1
Efflux transporter, RND family, MFP subunit; KEGG: agr:AGROH133_15208 5.6e-15 transmembrane efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.747
KXB74009.1
Hypothetical protein.
       0.746
KXB81592.1
Hypothetical protein.
  
 0.620
KXB81560.1
Hypothetical protein.
  
 0.620
KXB77510.1
Auxiliary transport protein, membrane fusion protein family protein; KEGG: pfe:PSF113_5667 1.3e-09 secretion protein family protein K01993.
  
 0.620
KXB76924.1
Hypothetical protein.
  
 0.620
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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