STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75839.1Transcriptional regulator, LacI family; KEGG: bcy:Bcer98_0837 2.9e-28 alanine racemase; Psort location: Cytoplasmic, score: 9.97. (387 aa)    
Predicted Functional Partners:
KWZ75698.1
KEGG: cai:Caci_5761 1.9e-38 LacI family transcriptional regulator; Psort location: Cytoplasmic, score: 9.67.
  
     0.775
KWZ73613.1
Sugar-binding domain protein; KEGG: fre:Franean1_7053 1.1e-51 LacI family transcriptional regulator K02529; Psort location: Cytoplasmic, score: 9.97.
  
     0.775
KWZ75091.1
Sugar-binding domain protein; KEGG: ami:Amir_1824 1.1e-69 LacI family transcriptional regulator K02529; Psort location: Cytoplasmic, score: 9.97.
  
     0.774
KWZ73818.1
Sugar-binding domain protein; KEGG: ach:Achl_2894 6.7e-52 LacI family transcriptional regulator K02529; Psort location: Cytoplasmic, score: 9.97.
  
     0.774
KWZ75840.1
Alpha-galactosidase; KEGG: bde:BDP_2229 1.5e-228 aga; alpha-galactosidase K07407; Psort location: Cytoplasmic, score: 7.50.
    
  0.699
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
   0.536
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
   0.517
pheT
KEGG: bde:BDP_1298 0. pheT; phenylalanyl-tRNA synthetase subunit beta K01890; Psort location: Cytoplasmic, score: 9.97.
    
   0.517
KWZ76052.1
KEGG: bls:W91_0477 5.8e-156 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.443
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
    
   0.402
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.