STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75961.1DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (374 aa)    
Predicted Functional Partners:
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.999
KWZ75110.1
KEGG: bbv:HMPREF9228_0747 3.3e-75 holA; DNA polymerase III subunit delta K02340; Psort location: Cellwall, score: 8.19.
  
 
 0.996
KWZ72818.1
KEGG: bde:BDP_0228 9.9e-138 dnaX; DNA polymerase III subunits gamma and tau K02343; Psort location: Cytoplasmic, score: 7.50.
   
 0.996
KWZ73770.1
KEGG: gva:HMPREF0424_1114 0. dnaE; DNA polymerase III subunit alpha K02337; Psort location: Cytoplasmic, score: 9.97.
    
 0.995
dnaA
Replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.994
KWZ72834.1
KEGG: blk:BLNIAS_02588 2.6e-105 DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.990
KWZ73603.1
Exonuclease; KEGG: gvh:HMPREF9231_0355 1.2e-61 exonuclease; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 7.50.
  
 0.989
recF
Putative DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.
 
  
 0.981
KWZ74152.1
KEGG: bbi:BBIF_1332 5.9e-37 dnaQ; DNA polymerase III subunit alpha; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97.
    
 0.951
KWZ73648.1
Putative exodeoxyribonuclease III; KEGG: bad:BAD_1058 8.8e-114 exodeoxyribonuclease; K01142 exodeoxyribonuclease III; Psort location: Cytoplasmic, score: 9.97.
   
 0.938
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.