STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75975.1Putative sugar ABC transporter, ATP binding protein; KEGG: gvh:HMPREF9231_1186 1.0e-215 rbsA_2; ribose transport, ATP-binding protein RbsA K10548; Psort location: CytoplasmicMembrane, score: 8.78. (515 aa)    
Predicted Functional Partners:
KWZ75976.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: ppy:PPE_01067 5.9e-92 sugar ABC transporter permease K10547; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
KWZ75970.1
KEGG: bde:BDP_2072 3.1e-70 rbsA2; ribose transport ATP-binding protein RbsA K02056; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 
0.939
KWZ75974.1
Putative multiple sugar-binding periplasmic protein SbpA; KEGG: mmw:Mmwyl1_4110 7.0e-57 monosaccharide-transporting ATPase K10546.
 
  0.915
KWZ73425.1
Putative multiple sugar-binding periplasmic protein SbpA; KEGG: mmw:Mmwyl1_4110 4.3e-57 monosaccharide-transporting ATPase K10546.
 
  0.875
KWZ73423.1
Putative multiple sugar-binding periplasmic protein SbpA; KEGG: mmw:Mmwyl1_4110 1.4e-58 monosaccharide-transporting ATPase K10546.
 
  0.865
KWZ73572.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
 0.758
KWZ75977.1
Hypothetical protein.
       0.484
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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