STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75988.1Putative aspartate transaminase; KEGG: efc:EFAU004_00474 5.0e-79 aromatic amino acid aminotransferase K00841; Psort location: Cytoplasmic, score: 7.50. (391 aa)    
Predicted Functional Partners:
KWZ75989.1
Putative proline-specific permease ProY; KEGG: ctu:CTU_07460 7.6e-76 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.732
argD
Aminotransferase, acetylornithine/succinylornithine family; KEGG: bad:BAD_0922 1.2e-146 argD; acetylornithine aminotransferase; K00818 acetylornithine aminotransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
  
 0.697
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 
 0.692
KWZ72657.1
Citrate synthase 2; KEGG: sgt:SGGB_0689 7.6e-163 citZ; citrate synthase K01647; Psort location: Cytoplasmic, score: 9.97.
  
 0.688
argG
KEGG: bni:BANAN_03590 2.3e-200 argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 7.50; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.678
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
 0.678
KWZ73898.1
KEGG: bad:BAD_0507 3.1e-63 metC; cystathionine beta-lyase; K01760 cystathionine beta-lyase; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.676
hisC
Putative histidinol-phosphate transaminase; KEGG: bde:BDP_1582 1.1e-143 hisC; histidinol-phosphate aminotransferase K00817; Psort location: Cytoplasmic, score: 7.50; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
 
0.674
KWZ76057.1
Aminotransferase, class I/II; KEGG: blm:BLLJ_1484 1.7e-126 aminotransferase; K14155 cystathione beta-lyase; Psort location: Cytoplasmic, score: 7.50.
  
  
0.655
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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