STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75655.1KEGG: apb:SAR116_2221 1.8e-10 excisionase family DNA binding domain-containing protein; Psort location: Cytoplasmic, score: 7.50. (154 aa)    
Predicted Functional Partners:
KWZ75656.1
Toxin-antitoxin system, toxin component, PIN domain protein.
 
  
 0.965
KWZ75657.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.655
KWZ72262.1
Hypothetical protein; KEGG: bnm:BALAC2494_01022 1.0e-144 ferredoxin--NADP(+) reductase K00528; Psort location: Cytoplasmic, score: 9.97.
  
  
  0.527
argH
Argininosuccinate lyase; KEGG: bbp:BBPR_1148 3.7e-202 argH; argininosuccinate lyase ArgH K01755; Psort location: Cytoplasmic, score: 7.50.
  
  
  0.495
KWZ75654.1
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
       0.468
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
     
 0.443
KWZ75546.1
KEGG: gvh:HMPREF9231_0432 2.6e-130 acetyl-CoA C-acetyltransferase; K00626 acetyl-CoA C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
  0.418
KWZ72656.1
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
     
 0.416
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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