STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75521.1Hypothetical protein; KEGG: dsa:Desal_0333 0.0058 NADH:ubiquinone oxidoreductase subunit E; K00350 Na+-transporting NADH:ubiquinone oxidoreductase subunit E; Psort location: CytoplasmicMembrane, score: 10.00. (150 aa)    
Predicted Functional Partners:
KWZ75522.1
Glycosyl hydrolase family 3 protein; KEGG: bde:BDP_0220 1.2e-178 beta-glucosidase; Psort location: Extracellular, score: 9.13.
       0.773
KWZ75523.1
Hypothetical protein; KEGG: eci:UTI89_C4210 4.9e-14 yicJ; transporter K03292; Psort location: CytoplasmicMembrane, score: 10.00.
       0.601
KWZ75524.1
KEGG: phe:Phep_3887 1.2e-141 alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase.
       0.601
KWZ75520.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: bde:BDP_0222 1.4e-282 glycosyl hydrolase family 2 K01190; Belongs to the glycosyl hydrolase 2 family.
       0.548
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.