STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75531.1Transporter, major facilitator family protein; KEGG: rcu:RCOM_1175530 3.1e-15 sugar transporter, putative; Psort location: CytoplasmicMembrane, score: 10.00. (459 aa)    
Predicted Functional Partners:
KWZ75530.1
KEGG: bde:BDP_0161 7.0e-89 alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase.
       0.782
KWZ75529.1
KEGG: bde:BDP_0161 1.8e-193 alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase; Psort location: CytoplasmicMembrane, score: 8.16.
       0.664
KWZ75906.1
KEGG: gvg:HMPREF0421_20182 4.1e-116 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.638
KWZ73903.1
Hypothetical protein; KEGG: bpb:bpr_I0662 6.4e-08 ogt; methylated-DNA-protein-cysteine S-methyltransferase Ogt.
  
     0.549
KWZ75532.1
KEGG: efu:HMPREF0351_12109 0.0038 TetR/AcrR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
     
 0.542
KWZ73441.1
Transcriptional regulator, MarR family; KEGG: cbj:H04402_02264 1.4e-05 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase; Psort location: Cytoplasmic, score: 7.50.
  
     0.501
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.