STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75549.1Transporter, major facilitator family protein; KEGG: crn:CAR_c22760 5.4e-43 multidrug resistance protein B; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the major facilitator superfamily. (468 aa)    
Predicted Functional Partners:
KWZ75550.1
Hypothetical protein; KEGG: tme:Tmel_1425 0.0021 CBS domain-containing protein; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme).
      0.968
KWZ75548.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.943
KWZ75547.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.518
KWZ73696.1
Transporter, major facilitator family protein; KEGG: apb:SAR116_2000 1.6e-08 Bcr/CflA subfamily drug resistance transporter K07552; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.410
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.