STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75382.1Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (261 aa)    
Predicted Functional Partners:
KWZ73970.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.742
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.741
KWZ75383.1
FAH family protein; KEGG: bde:BDP_1997 4.0e-109 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Psort location: Cytoplasmic, score: 7.50.
       0.721
KWZ75384.1
KEGG: bbi:BBIF_0263 1.4e-131 thrA; Homoserine dehydrogenase; K00003 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
     0.611
KWZ73766.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.607
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
    0.572
KWZ75097.1
Putative pyridoxal kinase; KEGG: bbf:BBB_1152 7.6e-115 pdxK; pyridoxine kinase K00868; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.552
KWZ75381.1
Hypothetical protein.
       0.519
KWZ75386.1
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
    0.502
rpmC
Ribosomal protein L29; KEGG: apb:SAR116_2399 4.0e-06 50S ribosomal protein L29 K02904; Psort location: Cytoplasmic, score: 7.50; Belongs to the universal ribosomal protein uL29 family.
   
    0.479
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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