STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75417.1Hydrolase, NUDIX family; KEGG: bde:BDP_1811 1.6e-64 hydrolase; Psort location: Cytoplasmic, score: 7.50. (643 aa)    
Predicted Functional Partners:
KWZ74070.1
MaoC-like protein; KEGG: bad:BAD_0256 0. fas; fatty acid synthase Fas; K11533 fatty acid synthase, bacteria type; Psort location: CytoplasmicMembrane, score: 9.78.
  
 
 0.964
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
     
 0.768
KWZ75419.1
Hypothetical protein.
       0.762
KWZ75420.1
Peptidase, S9A/B/C family, catalytic domain protein; KEGG: bbf:BBB_0374 3.9e-237 ptrB; protease K01354; Psort location: Cytoplasmic, score: 7.50.
       0.762
KWZ74009.1
KEGG: gva:HMPREF0424_0254 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 
 0.706
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.664
KWZ75216.1
KEGG: bad:BAD_0688 3.1e-173 pta; phosphate acetyltransferase; K13788 phosphate acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
    
 0.662
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
   
  0.657
leuB
Putative 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily.
    
 0.640
KWZ75422.1
KEGG: bcv:Bcav_1428 1.5e-70 biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A; Psort location: Cytoplasmic, score: 9.97.
       0.621
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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