STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74722.1Hypothetical protein; KEGG: ase:ACPL_6362 2.7e-23 Replicase polyprotein 1ab; Psort location: Cytoplasmic, score: 7.50. (271 aa)    
Predicted Functional Partners:
KWZ74721.1
HAD hydrolase, family IIA; KEGG: bde:BDP_1281 6.9e-82 haloacid dehalogenase; Psort location: Cytoplasmic, score: 7.50.
    
 0.967
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
 
  0.889
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.885
KWZ74710.1
HAD hydrolase family; KEGG: cmi:CMM_0484 1.3e-87 nagD; putative N-acetylglucosamine-6-phosphate deacetylase K02566; Psort location: Cytoplasmic, score: 7.50.
    
 0.878
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.861
KWZ75889.1
KEGG: apb:SAR116_0107 3.4e-25 nitrogen regulatory protein P-II K04751; Psort location: CytoplasmicMembrane, score: 8.78; Belongs to the P(II) protein family.
    
 
 0.792
KWZ75427.1
Cyclic nucleotide-binding domain protein; KEGG: bde:BDP_1802 2.1e-80 Crp family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
   
 0.780
KWZ74045.1
KEGG: bbc:BLC1_0390 1.9e-125 DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha; Psort location: Cytoplasmic, score: 9.97.
   
 0.773
KWZ73753.1
Putative hydrolase; Psort location: Cytoplasmic, score: 7.50.
  
     0.759
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.722
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.