STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74572.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (296 aa)    
Predicted Functional Partners:
KWZ74573.1
KEGG: apb:SAR116_2174 1.4e-05 cold-shock DNA-binding domain-containing protein K03704; Psort location: Cytoplasmic, score: 9.97.
       0.774
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.764
KWZ73756.1
Hypothetical protein; KEGG: car:cauri_2087 0.0017 pflAN; pyruvate formate lyase activating enzyme K04069; Psort location: Cytoplasmic, score: 7.50.
  
     0.756
KWZ75127.1
Hypothetical protein.
  
     0.742
KWZ73542.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.740
KWZ73753.1
Putative hydrolase; Psort location: Cytoplasmic, score: 7.50.
  
     0.711
KWZ73317.1
KEGG: bbb:BIF_01561 1.4e-69 phosphoglycerate mutase; Psort location: Cytoplasmic, score: 7.50.
  
     0.711
KWZ75966.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.696
KWZ74722.1
Hypothetical protein; KEGG: ase:ACPL_6362 2.7e-23 Replicase polyprotein 1ab; Psort location: Cytoplasmic, score: 7.50.
  
     0.691
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.687
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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