STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74152.1KEGG: bbi:BBIF_1332 5.9e-37 dnaQ; DNA polymerase III subunit alpha; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. (247 aa)    
Predicted Functional Partners:
KWZ75961.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
    
 0.951
KWZ73770.1
KEGG: gva:HMPREF0424_1114 0. dnaE; DNA polymerase III subunit alpha K02337; Psort location: Cytoplasmic, score: 9.97.
   
 0.949
KWZ75110.1
KEGG: bbv:HMPREF9228_0747 3.3e-75 holA; DNA polymerase III subunit delta K02340; Psort location: Cellwall, score: 8.19.
    
 0.947
KWZ72818.1
KEGG: bde:BDP_0228 9.9e-138 dnaX; DNA polymerase III subunits gamma and tau K02343; Psort location: Cytoplasmic, score: 7.50.
   
 0.945
KWZ72834.1
KEGG: blk:BLNIAS_02588 2.6e-105 DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.
   
 0.945
KWZ73603.1
Exonuclease; KEGG: gvh:HMPREF9231_0355 1.2e-61 exonuclease; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 7.50.
    
 0.591
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
   
 0.577
ligA
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
   
 
 0.541
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.539
KWZ74153.1
Death-on-curing family protein.
       0.470
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.