STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74002.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (447 aa)    
Predicted Functional Partners:
KWZ74003.1
YigZ family protein; KEGG: gvg:HMPREF0421_21290 1.2e-52 IMPACT family protein; Psort location: Cytoplasmic, score: 7.50.
       0.773
KWZ74004.1
Leucine rich repeat variant.
       0.773
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.615
rpsI
Ribosomal protein S9; KEGG: apb:SAR116_0492 3.9e-24 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.67; Belongs to the universal ribosomal protein uS9 family.
       0.567
KWZ74001.1
KEGG: cgb:cg1956 3.7e-67 recJ; single-stranded-DNA-specific exonuclease K07462; Psort location: Cytoplasmic, score: 7.50.
       0.554
KWZ75990.1
ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_1743 7.4e-133 ABC transporter ATPase/permease; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.480
KWZ73315.1
GtrA-like protein; KEGG: fal:FRAAL4856 0.00049 dolichyl-phosphate beta-glucosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.472
KWZ73341.1
KEGG: llk:LLKF_1844 6.1e-58 malG; maltose ABC transporter permease K10110; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.456
KWZ73339.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 4.6e-25 maltose/maltodextrin ABC transporter ATP-binding protein K10108.
  
     0.426
KWZ74559.1
GDSL-like protein; KEGG: rpe:RPE_0303 0.00022 GDSL family lipase; K01076.
  
     0.424
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.