STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74040.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (785 aa)    
Predicted Functional Partners:
KWZ74039.1
LemA family protein.
       0.762
KWZ73324.1
Ser/Thr phosphatase family protein; KEGG: afm:AFUA_4G12720 0.0031 phosphoesterase K01175; Psort location: Cytoplasmic, score: 7.50.
  
     0.615
KWZ73767.1
DivIVA domain protein; KEGG: edi:EDI_048910 1.3e-12 intracellular protein transport protein USO1; Psort location: Cellwall, score: 8.97.
  
     0.586
KWZ75923.1
Hypothetical protein; KEGG: ase:ACPL_6704 0.00044 protease; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.572
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
       0.568
KWZ74571.1
KEGG: apb:SAR116_0757 2.5e-05 universal stress protein family protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.562
KWZ73751.1
Hypothetical protein; KEGG: bmq:BMQ_1782 3.1e-05 macrolide 2'-phosphotransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.516
KWZ75235.1
KEGG: bde:BDP_0897 2.8e-85 ABC transporter ATP-binding protein K02074; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.513
KWZ73484.1
Hypothetical protein; KEGG: gvg:HMPREF0421_20853 5.5e-41 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.500
KWZ74590.1
Hypothetical protein.
  
     0.462
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.