STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74082.1Hypothetical protein; KEGG: bde:BDP_0845 1.4e-154 lysX; lysylcardiolipin synthase/Lysyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (893 aa)    
Predicted Functional Partners:
KWZ74081.1
Hypothetical protein; KEGG: ase:ACPL_3309 5.6e-06 Endo-1,4-beta-xylanase Z; Psort location: CytoplasmicMembrane, score: 9.35.
 
   
 0.977
lysS
lysine--tRNA ligase; KEGG: bbc:BLC1_0418 3.6e-227 lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
 
 
 0.750
KWZ74083.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.737
KWZ74499.1
Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
  
     0.631
KWZ74079.1
Hypothetical protein; KEGG: bnm:BALAC2494_01394 1.7e-156 Hydrolase acting on acid anhydrides in phosphorous-containing anhydrides; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.597
KWZ74084.1
Transporter, major facilitator family protein; KEGG: sna:Snas_2521 4.4e-19 aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.586
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.536
acpS
Phosphopantetheine--protein transferase domain protein; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
 
     0.531
KWZ74080.1
UvrD/REP helicase; KEGG: bad:BAD_1305 4.5e-165 ATP-dependent DNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: CytoplasmicMembrane, score: 9.55; Belongs to the helicase family. UvrD subfamily.
 
     0.531
KWZ74590.1
Hypothetical protein.
  
     0.462
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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